NAG Library
Essential Introduction
Note: this document is essential reading for any prospective user of the library.
1 Summary for All Users
All users both familiar or unfamiliar with this Library who are thinking of using a function from it, are asked to please
follow these instructions:
| (a)
|
read the whole of this Essential Introduction;
|
| (b)
|
select an appropriate chapter or function by:
|
| (c)
|
read the relevant Chapter Introduction;
|
| (d)
|
choose a function, and read the function document. If the function does not after all meet your needs, return to step (b);
|
| (e)
|
read the Users' Note for your implementation;
|
| (f)
|
consult local documentation, which should be provided by your local support staff, about access to the Library on your computing
system;
|
| (g)
|
obtain an online copy of the example program for the particular function of interest and experiment with it. |
You should now be in a position to include a call to the function in a program, and to attempt to compile and run it. You
may of course need to refer back to the relevant documentation in the case of difficulties, for advice on assessment of results,
and so on.
As you become familiar with the Library, some of steps
(a) to
(g) can be omitted, but it is always essential to:
- be familiar with this Essential Introduction;
- be familiar with the Chapter Introduction;
- read the function document;
- be aware of the Users' Note for your implementation.
2 The Library and its Documentation
2.1 Structure of the Library
The NAG C Library is a comprehensive collection of functions for the solution of numerical and statistical problems.
The Library is divided into
chapters, each devoted to a branch of numerical analysis or statistics. Each chapter has a three-character name and a title,
e.g.,
Exceptionally,
Chapters h and
s have one-character names. The chapters and their names are based on the ACM modified SHARE classification index (see
ACM (1960–1976)).
All documented functions have two names. One is based on the SHARE index classification and consists of a six-character name
which begins with the characters of the chapter/subchapter name, for example
The letters of this type of function name are always lower case, the second and third characters being digits and the last
letter being c. This function name is referred to as the short name. Each function also has a more meaningful and longer name,
for example
which we refer to as the long name. The long name may be used as an alternative to the short name when calling the function.
See
Section 3.3 for further details.
2.2 Structure of the Documentation
The NAG Library Manual is the principal documentation for the NAG C Library.
It has the same chapter structure as the Library: each chapter of functions in the Library has a corresponding chapter (of
the same name) in the Manual. The chapters occur in alphanumeric order. General introductory documents appear at the beginning
of the Manual.
Each chapter consists of the following documents:
A function document has the same short name as the function which it describes. Within each chapter, function documents occur
in alphanumeric order.
It should be noted that all the computational functions from LAPACK, Release 3 are included in the NAG C Library and can be
called by their LAPACK name, although not all of these functions are currently documented in
Chapters f07 and
f08.
Documentation is provided in the following formats:
- XHTML+MathML, a fully linked version of the manual using XHTML and MathML (recommended for browsing) and providing links to the PDF version
of each document (recommended for printing); and
- PDF, a full PDF manual browsed using the PDF bookmarks, or via HTML index files.
Advice on viewing and navigating the formats available can be found in the document
Online Documentation.
The most up-to-date version of the documentation is accessible via the NAG
web site (see
Section 5).
2.3 Implementations of the Library
The Library is available on many different computer systems. For each distinct system, an implementation of the Library is prepared by NAG, e.g., the Windows 64 bit implementation. The implementation is distributed to sites as
one or more tested compiled libraries.
An implementation is usually specific to a range of machines (e.g., PCs running specified variants of the Microsoft Windows
operating system); it may also be specific to a particular C compiler, or compiler option (such as threaded mode).
Essentially the same facilities are provided in all implementations of the Library, but, because of differences in arithmetic
behaviour and in the compilation system, functions cannot be expected to give identical results on different systems, especially
for sensitive numerical problems.
The documentation supports all implementations of the Library, with the help of a few simple conventions, and a small amount
of implementation-dependent information, which is published in a separate
Users' Note for each implementation.
2.4 Library Identification
Periodically a new Mark of the NAG C Library is released: new functions are added, corrections and/or improvements are made to existing functions;
and occasionally functions are withdrawn if they have been superseded by improved functions.
You must know
which implementation and
which mark of the Library you are using or intend to use. To find out which implementation, precision and mark of the Library is available
at your site, you can run a program which calls the NAG C Library function
nag_implementation_details (a00aac).
This function has no arguments; it simply outputs text to the standard output, if available or to a pop-up window. Details
can also be found by a call to
nag_implementation_separated_details (a00adc).
2.5 C Language Standards
All functions in the NAG C Library conform fully to ANSI C, and functions introduced since Mark 6 take advantage of the const keyword to allow for safer code which can be more easily optimized. Although pre-Mark 6 functions have not yet been modified,
it is our intention to extend the use of const and other features of the C99 standard in future releases.
3 Using the Library
3.1 General Advice
A NAG C Library function
cannot be guaranteed to return meaningful results irrespective of the data supplied to it. Care and thought
must be exercised in:
| (a) |
formulating the problem; |
| (b) |
programming the use of library functions; |
| (c) |
assessing the significance of the results. |
The remainder of
Section 3 is concerned with (b).
3.2 Programming Advice
The Library and its documentation are designed with the assumption that you will write a calling program in C (although it
may be called from other languages – see
Section 3.8).
When a suitable NAG function has been selected, the function must be called from the C Library via a suitable user-written
program, the calling program. This manual assumes that you have sufficient knowledge of the C programming language to be able
to write such a program. Each C Library function document contains an example of a suitable calling program (see
Section 4.4).
When writing a calling program, a number of environmental features common to all such NAG programs must be observed in addition
to specific features which are relevant to the particular NAG function being called. These features are discussed below; you
should refer to the example program while studying the description of these features. You are also recommended to pay particular
attention to the specification of the function arguments, array sizes and array indices.
3.2.1 The NAG C environment
The environment for the NAG C Library is defined in a number of include files; a list is given in
Section 3.2.1.6. The most important of the header files is
nag.h, which must be included in any program that calls a NAG C Library function and must precede any other NAG header file.
These include files are normally located in the standard directory for C include files. The exact location is installation
dependent; please see the
Users' Note or other local documentation.
The file nag.h defines data types and error codes used in the NAG C Library together with a number of macros used in example programs.
You may also need to include the header file
nag_stdlib.h in the calling program; see
Section 3.2.1.6.
3.2.1.1 NAG data types
- Integer
- This data type is used for integer arguments to NAG C Library functions. It is normally defined to be long.
- Nag_Boolean
- This is an enumeration type defined as
typedef enum{Nag_FALSE=0; Nag_TRUE=1} Nag_Boolean;
This replaces the previously used Boolean type. In order that you can continue to use your existing program, a preprocessor
define CL07_COMPATIBILITY has been introduced. This feature can be used from the command line by specifying
-DCL07_COMPATIBILITY
- Complex
- This data type is a structure defined for use with complex numbers:
typedef struct {double re, im;} Complex;
- Pointer
- This data type represents a generic pointer and is defined as void *.
- Nag_User
- This data type is a structure containing a generic pointer used for communicating information between a user-defined function
and your calling program, where the user-defined function is supplied as an argument to the NAG function. This avoids the
necessity of using global variables for such communication. A brief example of use (taken from Chapter d02) is given below:
struct user
{ double xend, h;
Integer k;
};
main()
{
Integer neq = 3;
double x = 0.0, tol = 0.0001, y[3] = {1.0, 0.0, 0.0};
Nag_User comm;
struct user s;
/* assign address of user defined structure to comm.p */
comm.p = (Pointer)&s;
s.xend = 10.0;
s.k = 4;
s.h = (s.xend-x) /(double)(s.k+1);
d02ejc(neq, fcn, NULLFN, &x, y, s.xend, tol, Nag_Relative,
out, NULLFN, &comm, NAGERR_DEFAULT);
}
static void out(Integer neq, double *xsol, double y[], Nag_User *comm)
{
Integer j;
struct user *s = (struct user *)comm->p;
Vprintf("%8.2f", *xsol);
for (j=0; j<3; ++j)
Vprintf("%13.5f", y[j]);
Vprintf ("\n");
*xsol = s->xend - (double)s->k * s->h;
s->k--;
}
- Nag_Comm
- This is also a communication structure with a generic pointer with usage similar to Nag_User. In addition it has double* and
Integer* pointers to allow double and Integer arrays to be communicated with no casting.
- Nag_FileID
- This data type is an integer type used by certain NAG C Library functions which deal with input or output files. Functions
in Chapter x04 must be used to associate a file name with the file ID.
- Enumeration Types
- A number of other enumeration types are defined in nag_types.h for use in calls to various NAG C Library functions. You must use these enumeration types in your calling programs.
- Other structure types
- A number of structures have been defined to facilitate calls to NAG functions. Please note that only those components of
a structure that are relevant to a call to a specific NAG function are described in the corresponding function document.
A complete specification of a NAG defined structure can be found in the NAG C Library header file nag_types.h included in the distribution materials. For further details please contact NAG.
3.2.1.2 Memory management in the Library
Memory is frequently dynamically allocated within NAG C Library functions. All requests for memory are checked for success
or failure. In the unlikely event of failure occurring the Library function returns or terminates with the error state
NE_ALLOC_FAIL (details of error handling in the Library are given in
Section 3.6).
The macros
NAG_ALLOC and
NAG_FREE are defined to select suitable memory management functions for the NAG C Library.
NAG_ALLOC has two arguments; the first specifies the number of elements to be allocated while the second specifies the type of element.
The statement
p = NAG_ALLOC(n, double);
allocates n elements of memory of type double to p, a pointer to double.
NAG_FREE frees memory allocated by
NAG_ALLOC; its single argument is the pointer which specifies the memory to be deallocated. The statement
NAG_FREE(p);
deallocates memory pointed to by p and sets its value to NULL.
These macros are defined in the header file
nag_stdlib.h which must be included if these macros are used in the calling program.
NAG_FREE must be used to free memory allocated and returned from a NAG function. If memory is allocated using
NAG_ALLOC for whatever reason, it must be freed using
NAG_FREE. For an illustration of its use, see
Section 9.1 in nag_1d_quad_inf_wt_trig_1 (d01ssc).
3.2.1.3 The Nag_Order argument
Different programming languages lay out two-dimensional data in memory in different ways. The C language treats a two-dimensional
array as a single block of memory arranged in rows, the so called ‘row-major’ ordering. Some other languages, notably Fortran,
arrange two-dimensional arrays by column (‘column-major’ ordering). Commencing at Mark 7, those functions in the C Library
that deal with two-dimensional arrays and where it is sensible to do so, have an extra argument, called order, which allows
you to specify that your data is arranged in rows (by setting order to Nag_RowMajor) or in columns (by setting order to Nag_ColMajor).
This is particularly useful if the NAG C Library is being called from a language which uses the column-major ordering or if
you wish to call a function from a language, such as Fortran, which supports column-major ordering.
3.2.1.4 Array references
In C it is possible to declare a two-dimensional variable using notation of the form:
double a[dim1][dim2];
When this variable is an argument to a function, it is effectively treated by the compiler as a pointer, *a, of type double with an allocated memory of dim1*dim2 on the stack. The address of an element of this array, say a[3][5] is then an explicit address computed to be *(a+3*dim2+5), since C stores data in row-major order.
Alternatively it is possible for you to allocate memory explicitly (on the heap) to a pointer of type
double *, using the form:
| a=(double *)malloc((size_t)(dim1*dim2*sizeof(double)); |
[1] |
In this case the C pre-processor allows a succinct notation for computing this explicit address by using a macro definition:
| #define A(I,J) a[I*dim2+J] |
[2] |
The element of this array if indexed
ij is then indexed using the pointer notation
*(a+i*dim2+j) or by using the array notation
a[i*dim2+j]; or by using
A(I,J) assuming the macro
[2] is already defined.
We often wish to refer to the storage of elements representing a submatrix of the matrix
A, for example, the submatrix comprising rows
k to
l and columns
m to
n. For convenience we use the notation
a(k:l,m:n) to refer to those elements of
a storing the given submatrix with elements
Aij = A(i - 1,j - 1) (see
[2] and
[4]), for
i = k, … ,l and
j = m, … ,n. That is,
| a(k:l,m:n) = {a[p], p = (i-1)*pda+j-1, i=k,...,l and j=m,...,n}, |
[3] |
for row major ordering.
If the data is to be stored using column-major ordering and we have declared an array variable as
double a[dim1][dim2];
then the element indexed
ij is effectively transposed. That is, the element
a[i][j] under row-major ordering is the element
a[j][i] under column-major ordering.
As another alternative you may choose to malloc the required memory as in
[1] above. In this case, the element indexed
ij is using the pointer notation
*(a+j*dim1+i); or by using the array notation
a[j*dim1+i]; or by using
A(I,J) if the macro is defined as
| #define A(I,J) A[J*dim1+I] |
[4] |
Note the difference in definition between
[2] and
[4] above.
In order to simplify the documentation, we refer to array elements using the macro definitions above. Further, we note that
in the pre-processor directive
[2] and
[4], the critical dimension is either
dim2 if the row-major ordering is used or
dim1 if column-major ordering is used. We designate either
dim2 or
dim1 as the principal dimension depending on the storage ordering scheme. The principal dimension can be thought of as a stride
which must be taken to traverse either a row or a column depending on the order argument.
We illustrate these concepts using two examples. In the first example, memory is allocated while in the second example memory
is declared. In both examples, row or column modes are demarcated using the pre-processor macro NAG_ROW_MAJOR. Memory is allocated using NAG_ALLOC, which is a macro defined in nag_stdlib.h, in preference to explicit malloc calls. This macro maps to calls to internal library functions to allocate memory. Also
note the use of NAG_FREE to free the memory.
Example 1
/* Example Program, with memory allocated, based on:
*
* nag_dorgqr (f08afc) Example Program.
*
* Copyright 2001 Numerical Algorithms Group.
*
* Mark 7, 2001.
*/
#include <stdio.h>
#include <string.h>
#include <nag.h>
#include <nag_stdlib.h>
#include <nagf08.h>
#include <nagx04.h>
int main(void)
{
/* Scalars */
Integer i, j, m, n, pda_row, pda_column, tau_len;
Integer exit_status=0;
NagError fail;
/* Arrays */
char *title=0;
double *a_row=0, *a_column=0, *tau=0;
char matrx_data [] = {
" -0.57 -1.28 -0.39 0.25 "
" -1.93 1.08 -0.31 -2.14 "
" 2.30 0.24 0.40 -0.35 "
" -1.93 0.64 -0.66 0.08 "
" 0.15 0.30 0.15 -2.13 "
" -0.02 1.03 -1.43 0.50 "
}, *matrix_data_ptr = matrx_data;
/* Initialise strtok */
matrix_data_ptr = strtok(matrix_data_ptr, " \t\n");
#define A_COLUMN(I,J) a_column[(J-1)*pda_column + I - 1]
#define A_ROW(I,J) a_row[(I-1)*pda_row + J - 1]
INIT_FAIL(fail);
m = 6;
n = 4;;
pda_column = m;
pda_row = n;
tau_len = MIN(m, n);
/* Allocate memory */
if ( !(title = NAG_ALLOC(31, char)) ||
!(a_row = NAG_ALLOC(m * n, double)) ||
!(a_column = NAG_ALLOC(m * n, double)) ||
!(tau = NAG_ALLOC(tau_len, double)) )
{
Vprintf("Allocation failure\n");
exit_status = -1;
goto END;
}
#ifdef NAG_ROW_MAJOR
Vprintf("Using row major storage, allocated memory\n");
/* Read A from data above */
for (i = 1; i <= m; ++i)
{
for (j = 1; j<= n; j++)
{
sscanf(matrix_data_ptr, "%lf", &A_ROW(i,j));
matrix_data_ptr = strtok(0, " \t\n");
}
}
/* Compute the QR factorization of A */
f08aec(Nag_RowMajor, m, n, a_row, pda_row, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08aec.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Form the leading N columns of Q explicitly */
f08afc(Nag_RowMajor, m, n, n, a_row, pda_row, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08afc.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Print the leading N columns of Q only */
Vsprintf(title, "The leading %2ld columns of Q\n", n);
x04cac(Nag_RowMajor, Nag_GeneralMatrix, Nag_NonUnitDiag, m, n,
a_row, pda_row, title, 0, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from x04cac.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
#else
Vprintf("Using column major storage, allocated memory\n");
/* Read A from data above */
for (i = 1; i <= m; ++i)
{
for (j = 1; j<= n; j++)
{
sscanf(matrix_data_ptr, "%lf", &A_COLUMN(i,j));
matrix_data_ptr = strtok(0, " \t\n");
}
}
f08aec(Nag_ColMajor, m, n, a_column, pda_column, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08aec.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Form the leading N columns of Q explicitly */
f08afc(Nag_ColMajor, m, n, n, a_column, pda_column, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08afc.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Print the leading N columns of Q only */
Vsprintf(title, "The leading %2ld columns of Q\n", n);
x04cac(Nag_ColMajor, Nag_GeneralMatrix, Nag_NonUnitDiag, m, n,
a_column, pda_column, title, 0, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from x04cac.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
#endif
END:
if (title) NAG_FREE(title);
if (a_row) NAG_FREE(a_row);
if (a_column) NAG_FREE(a_column);
if (tau) NAG_FREE(tau);
return exit_status;
}
Example 2
/* Example Program, with memory declared, based on:
*
* nag_dorgqr (f08afc)) Example Program.
*
* Copyright 2001 Numerical Algorithms Group.
*
* Mark 7, 2001.
*/
#include <stdio.h>
#include <string.h>
#include <nag.h>
#include <nag_stdlib.h>
#include <nagf08.h>
#include <nagx04.h>
#define MMAX 10
#define NMAX 8
int main(void)
{
/* Scalars */
Integer i, j, m, n, pda, tau_len;
Integer exit_status=0;
NagError fail;
/* Arrays */
char title[30];
double a_row[MMAX][NMAX], a_column[MMAX][NMAX], tau[NMAX];
char matrx_data [] = {
" -0.57 -1.28 -0.39 0.25 "
" -1.93 1.08 -0.31 -2.14 "
" 2.30 0.24 0.40 -0.35 "
" -1.93 0.64 -0.66 0.08 "
" 0.15 0.30 0.15 -2.13 "
" -0.02 1.03 -1.43 0.50 "
}, *matrix_data_ptr = matrx_data;
/* Initialise strtok */
matrix_data_ptr = strtok(matrix_data_ptr, " \t\n");
INIT_FAIL(fail);
m = 6;
n = 4;;
pda = NMAX;
tau_len = MIN(m, n);
/* Read A from data above */
#ifdef NAG_ROW_MAJOR
for (i = 0; i < m; ++i)
{
for (j = 0; j< n; j++)
{
sscanf(matrix_data_ptr, "%lf", &a_row[i][j]);
matrix_data_ptr = strtok(0, " \t\n");
}
}
/* Compute the QR factorization of A */
Vprintf("Using row major storage, declared memory\n");
f08aec(Nag_RowMajor, m, n, &a_row[0][0], pda, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08aec.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Form the leading N columns of Q explicitly */
f08afc(Nag_RowMajor, m, n, n, &a_row[0][0], pda, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08afc.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Print the leading N columns of Q only */
Vsprintf(title, "The leading %2ld columns of Q\n", n);
x04cac(Nag_RowMajor, Nag_GeneralMatrix, Nag_NonUnitDiag, m, n,
&a_row[0][0], pda, title, 0, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from x04cac.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
#else
Vprintf("Using column major storage, declared memory\n");
for (i = 0; i < m; ++i)
for (j = 0; j< n; j++)
{
/* Note column data is transposed */
sscanf(matrix_data_ptr, "%lf", &a_column[j][i]);
matrix_data_ptr = strtok(0, " \t\n");
}
f08aec(Nag_ColMajor, m, n, &a_column[0][0], pda, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08aec.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Form the leading N columns of Q explicitly */
f08afc(Nag_ColMajor, m, n, n, &a_column[0][0], pda, tau, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from f08afc.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
/* Print the leading N columns of Q only */
Vsprintf(title, "The leading %2ld columns of Q\n", n);
x04cac(Nag_ColMajor, Nag_GeneralMatrix, Nag_NonUnitDiag, m, n,
&a_column[0][0], pda, title, 0, &fail);
if (fail.code != NE_NOERROR)
{
Vprintf("Error from x04cac.\n%s\n", fail.message);
exit_status = 1;
goto END;
}
#endif
END:
return exit_status;
}
3.2.1.5 Internal data structures in the NAG C Library
For efficiency, and wherever possible, the NAG C Library is designed to make use of the Basic Linear Algebra Subprograms (BLAS),
a suite of low-level functions tuned by many computer manufacturers for their particular hardware. Since the BLAS are specified
in Fortran, and therefore use the column-major storage order, the NAG C Library also uses this scheme, internally, for new
functions wherever it is practical. Thus any two-dimensional arrays you have provided may be re-ordered on entry and/or on
exit from the NAG functions, as appropriate. It is therefore slightly more efficient to use the column-major ordering; however,
except for very large data sets, the effect is negligible in practice.
3.2.1.6 Chapter header files
Chapter header files contain the function declarations for the NAG C Library with ANSI function prototyping. The appropriate
chapter header file must be included for each NAG function called by your program. For example, to call the function
nag_fft_complex (c06ecc) the chapter header file
nagc06.h must be included as
#include <nagc06.h>
The naming convention is to prefix the first three characters of the function name in lower case by
nag and use
.h as the postfix as in normal C practice, except that all functions in
Chapter s use the header file
nags.h.
(a) Header files intended for your inclusion within calling programs to the NAG C Library
nag.h defines the basic environment for use of the NAG C Library. This header file must be included in each calling program to
the NAG C Library and must precede all other header files that are included. This must be followed by one or more of the
following chapter header files.
| naga00.h |
naga02.h |
nagc02.h |
nagc05.h |
nagc06.h |
nagc09.h |
| nagd01.h |
nagd02.h |
nagd03.h |
nagd06.h |
nage01.h |
nage02.h |
| nage04.h |
nage05.h |
nagf01.h |
nagf02.h |
nagf03.h |
nagf04.h |
| nagf06.h |
nagf07.h |
nagf08.h |
nagf11.h |
nagf12.h |
nagf16.h |
| nagg01.h |
nagg02.h |
nagg03.h |
nagg04.h |
nagg05.h |
nagg07.h |
| nagg08.h |
nagg10.h |
nagg11.h |
nagg12.h |
nagg13.h |
nagh02.h |
| nagh03.h |
nagm01.h |
nags.h |
nagx01.h |
nagx02.h |
nagx04.h |
nag_stdlib.h defines the memory allocation macro NAG_ALLOC and NAG_FREE. You must include this header file if the NAG definitions of NAG_ALLOC and NAG_FREE, as used in the example programs, are required.
(b) The following three header files are included by nag.h (you do not need to supply a specific statement to include them)
nag_types.h defines the NAG types used in the Library.
nag_errlist.h defines the NAG error codes and messages used in the Library.
nag_names.h maps the NAG long names to short names.
3.3 Use of NAG Long Names
The long names defined in the header file nag_names.h are #defines. You should note that the short function names given in upper case in this file are also #defines and therefore
their corresponding long names will not require a terminating pair of brackets. These declarations are to be found in nagx01.h and nagx02.h. As the header file nag_names.h is already included via nag.h, you need not include nag_names.h in their calling programs.
3.4 Input/Output
NAG C Library functions output all error and warning messages to the C standard error stream
stderr.
Chapters e04,
g02 and
g13 will optionally output results to the C standard output stream
stdout or to an alternative user-specified file. A number of functions in
Minimizing or Maximizing a Function (
Chapter e04) and
Operations Research (
Chapter h) read input from external files.
3.5 Auxiliary Functions
In addition to the documented functions, the NAG C Library contains a much larger number of auxiliary functions. You do not
normally need to concern yourself with these functions, as they will automatically be called as required by the user-callable
function you have selected. The function declarations of these auxiliary functions can be found in the relevant chapter header
files together with the user-callable function declarations.
3.6 NAG Error Handling and the fail Argument
All functions that have error exits have an argument that allows you control over the printing of error messages when an error
is detected. There is a further option which allows you to either continue running your program, having returned from the
NAG function, or to stop with either an exit statement or an abort within the NAG function. The different ways of using these
error handling facilities are described below.
Note that in some implementations, the Library is linked with the vendor library containing LAPACK functions and the
Chapters f07 and
f08 function interfaces, where appropriate, act as wrappers to the corresponding vendor LAPACK functions. In this case, the
fail argument passed through the
Chapter f07 and
Chapter f08 interfaces does not have full control over the printing of error messages; nor does it determine whether or not control is
returned to the calling program when an error is detected.
3.6.1 Use of NAGERR_DEFAULT
The simplest method of using the error handling facility is to put NAGERR_DEFAULT in place of the fail argument in calls to the NAG C functions. If an error is detected the appropriate NAG error message is output on stderr and the program is stopped by the use of abort (in some implementations the program may be stopped with exit rather than abort). NAGERR_DEFAULT is defined in nag.h as (NagError *)0.
3.6.2 Use of the fail argument
The two remaining ways of using the NAG error handling facility both involve defining the
fail argument in the calling program. The
fail argument is of type
NagError which is a structure defined in
nag_types.h as:
typedef struct {
int code;
Nag_Boolean print;
char message[NAG_ERROR_BUF_LEN];
Integer errnum;
void (*handler)(char*,int,char*);
} NagError;
where the symbol
NAG_ERROR_BUF_LEN is normally defined to be 512.
This structure will contain the NAG error code and message on return from a call to a NAG C Library function. The NAG error
codes and associated NAG error messages are defined in
nag_errlist.h. A detailed description of the individual members of this structure is given below (see
Section 3.6.3).
The NAG error argument
fail is declared in the calling program as:
NagError fail;
The address of the argument is then passed to the NAG C function being called. Relevant members of the structure must be
initialized before passing the argument to the called function, even though you may not actually require all members. It
is recommended that the NAG defined macro INIT_FAIL be used for this purpose.
The
INIT_FAIL macro sets:
- fail.code = NE_NOERROR
- fail.print = Nag_FALSE
- fail.errnum = 0
- fail.handler = 0
The SET_FAIL macro is also available. It sets the contents of fail in the same way as INIT_FAIL except that fail.print is set to Nag_TRUE.
(a) Use of the fail argument with the print member set to Nag_TRUE
If you require that the NAG error message be printed when an error is found, but that the called function should return control
to the calling program, then the fail argument must be declared with all members initialized and the print member set to Nag_TRUE. Use of the NAG-defined macro SET_FAIL with the statement SET_FAIL(fail); performs the appropriate assignments. Alternatively the initialization could be done by declaring the fail argument with static and then setting fail.print to Nag_TRUE.
If no error occurs,
fail.code will contain the error code NE_NOERROR on return from the called function. However, if an error is found, the appropriate
NAG error message will be output on
stderr before returning control to the calling program;
fail.code will contain the relevant NAG error code. You must ensure that the calling program tests the
code member of the
fail argument on return from the NAG C function; you may then choose whether to exit the calling program or continue. See the
example program for
nag_real_svd (f02wec) for such a case. The option of continuing may be advantageous if the results being returned are of some value even when
an error has been detected. In the case of
nag_real_svd (f02wec) the code could be altered to allow the program to continue if the specific error code of
NE_QR_NOT_CONV occurs, as in such a case useful partial results are returned (see the function document for
nag_real_svd (f02wec)).
(b) Use of the fail argument with the print member set to Nag_FALSE
If you do not wish the NAG error messages to be printed automatically when an error is found then the fail argument must be declared with all members initialized and the print member set to Nag_FALSE. Use of static in the declaration of fail will automatically leave the print member as Nag_FALSE as will the use of INIT_FAIL(fail).
This method is suitable for those of you who wish to produce your own error messages rather than use the NAG C Library versions.
Alternative error messages may be coded directly into the calling program or be produced via a user-written error-handling
function which is assigned to the handler member of the fail argument (see the description of the handler member below).
3.6.3 The NagError structure
The individual members of the NagError structure are described in full below.
code
On successful exit, code contains the NAG error code NE_NOERROR; if an error or warning has been detected, then code contains the specific error or warning code. Error codes are prefixed with NE_ whereas warning codes have the prefix NW_.
print
print must be set before calling any NAG C Library function with a fail argument. It should be set to Nag_TRUE if the NAG error message is to be printed, otherwise Nag_FALSE. It is not changed
by the NAG C Library function.
message
On successful exit the array message contains the character string "NE_NOERROR:\n No error". If an error has been detected, then message contains the error message text, whether or not this is printed.
errnum
On successful exit, errnum is unchanged. For certain error or warning exits errnum will contain a value specifying additional information concerning the error. For example if a vector is supplied incorrectly,
then errnum may specify which component of the vector is wrong. Cases where errnum returns information are described in the relevant function documents.
handler
handler must be set to
0 if control is to be returned to the calling function after an error has been detected. Otherwise it must point to a user-supplied
error-handling function. An example of the ANSI C declaration of a user-supplied error function (here called
errhan) is:
void errhan(const char *string, int code, const char *name)
where
string contains the NAG error message on input,
code is the NAG error code and
name is the short name of the NAG C Library function which detected the error. If
print (see above) is Nag_TRUE, then the NAG error message is printed before the user-supplied error handler is called. If the
user-supplied error handler returns control, then the NAG error handler will return control to the calling program; otherwise
the user-supplied error handler may abort, exit or longjmp.
An elementary example of where this feature might be used is if it is preferred to print error messages on
stdout rather than the default
stderr. In this case
errhan could be defined as:
void errhan(const char *string, int code, const char *name)
{
if (code != NE_NOERROR)
{
Vprintf("\nError or warning from %s.\n", name);
Vprintf("%s\n", string);
}
}
3.7 Thread Safety
The NAG C Library is thread safe by design; all communication between functions is via argument lists, and, with the exception
of
Chapter g05 (
Random Number Generators), no use of read and write static storage is made.
In
Chapter g05, for efficiency,
functions in the range
Chapter g05c–
Chapter g05h use
global variables
internally for communication. Simultaneous access to these global variables by multiple threads has been guarded against
using thread mutexes. For UNIX machines, these mutexes come from the POSIX standard thread library (
ANSI/IEEE POSIX (1995)), also known as pthreads. For PC implementations of the NAG C Library, the mutexes are those implemented by the Microsoft
thread package.
The NAG C Library is therefore thread safe with respect to the thread package against which it was built, either pthreads
or Microsoft threads. Some older UNIX architectures did not have implementations of pthreads available, and implementations
of the NAG C Library on such architectures could not therefore be made thread safe – though of course on such machines it
would not be possible to write a POSIX multi-threaded program anyway.
Although the NAG C Library is thread safe, care must be taken to use it in a thread safe way. In particular, this is the
case with
Chapter c05 (
Roots of One or More Transcendental Equations), and
Chapter d01 (
Quadrature). In these chapters, the solution of a problem usually involves a user-supplied function being passed to the NAG Library
function, the user-supplied C function being called to evaluate the mathematical function which is the object of the problem.
It is sometimes the case that you would like the evaluation function to communicate with the main program, to pass relevant
information involved in the function evaluation. The simplest way to do this is to use global variables for communication,
but these global variables render the resulting code unsuitable for use by multiple threads simultaneously.
Using pthread or Microsoft thread package functionality, it is perfectly possible for you to avoid this problem by writing
code which passes thread-specific data between main program and evaluation function. As an alternative to this method, however,
where relevant we have provided alternative versions of the NAG Library functions. These alternative functions have an extra
argument which can be used for safe communication of additional data if it is required.
Finally we recommend that when using the C Library error mechanism, the output is switched off (by setting fail.print = Nag_FALSE).
Note that in some implementations, the Library is linked with one or more vendor libraries to provide, for example, efficient
BLAS routines. NAG cannot guarantee that any such vendor library is thread safe.
3.8 Calling the Library from Other Languages
In general the NAG C Library can be called from other computer languages (such as C++, Java and Visual Basic) provided that
appropriate mappings exist between their data types.
4 Using the Documentation
4.1 Using the Manual
The Manual is designed to serve the following functions
for the NAG C Library:
- to give background information about different areas of numerical and statistical computation;
- to advise on the choice of the most suitable NAG Library function or functions to solve a particular problem;
- to give all the information needed to call a NAG Library function correctly from a C program, and to assess the results.
At the beginning of the Manual are some general introductory documents which provide some background and additional information.
The document entitled ‘
NAG C Library News, Mark 9’ provides
details of new functions added, details of functions scheduled for withdrawal and details of functions withdrawn at this mark.
The document entitled ‘
Library Contents’ (a structured list of functions in the Library, by chapter) may help you to find the chapter, and possibly the function,
which you need to solve your problem.
The document entitled ‘
Functions Withdrawn or Scheduled for Withdrawal’ provides full details of all functions withdrawn from the NAG C Library and the document entitled ‘
Advice on Replacement Calls for Withdrawn/Superseded Functions’ provides details of new functionality provided by replacement functions.
The online documentation provides you with a fully linked HTML
Keyword Index (a keyword index to functions) and
GAMS Classification Index (a list of NAG functions classified according to the GAMS scheme).
Having found a likely chapter or function, you should read the corresponding Chapter Introduction, which gives background information about that area of numerical computation, and recommendations on the choice of a function,
including indexes, tables or decision trees.
When you have chosen a function, you must consult the function document. Each function document is essentially self-contained (it may, however, contain references to related documents). It includes
a description of the method, detailed specifications of each argument, explanations of each error exit, remarks on accuracy,
and (in most cases) an example program to illustrate the use of the function.
4.2 Structure of Function Documents
All function documents have the same structure consisting of nine numbered sections:
| 1. |
Purpose |
| 2. |
Specification |
| 3. |
Description |
| 4. |
References |
| 5. |
Arguments (see Section 4.3 below)
|
| 6. |
Error Indicators and Warnings |
| 7. |
Accuracy |
| 8. |
Further Comments |
| 9. |
Example (see Section 4.4 below)
|
In a few documents (notably
Chapters e04,
e05 and
h) there are a further three sections:
| 10. |
Algorithmic Details |
| 11. |
Optional Arguments |
| 12. |
Description of Monitoring Information |
4.3 Specification of Arguments
Section 5 of each function document contains the specification of the arguments, in the order of their appearance in the argument
list.
4.3.1 Classification of arguments
Arguments are classified as follows.
Input: you must assign values to these arguments on or before entry to the function, and these values are unchanged on exit from
the function.
Output: you need not assign values to these arguments before entry to the function; the function may assign values to them.
Input/Output: you must assign values to these arguments before entry to the function, and the function may then change these values.
Communication Structure and Arrays:
arguments which are used to communicate data from one function call to another.
External Procedure: a function which must be supplied (e.g., to evaluate an integrand or to print intermediate output). Usually it must be
supplied as part of your calling program, in which case its specification includes full details of its argument list and specifications
of its arguments (all enclosed in a box). Its arguments are classified in the same way as those of the Library function,
but because you must write the procedure rather than call it, the significance of the classification is different.
- Input: values may be supplied on entry.
- Output: you may or must assign values to these arguments before exit from your procedure.
- Input/Output: values may be supplied on entry, and you may or must assign values to them before exit from your procedure.
4.3.2 Constraints and suggested values
The word ‘
Constraint:’ or ‘
Constraints:’ in the specification of an
Input argument introduces a statement of the range of valid values for that argument, e.g.,
If the function is called with an invalid value for the argument
(e.g., n = 0), the function will usually take an error exit.
The phrase ‘Suggested Values:’ introduces a suggestion for a reasonable initial setting for an Input argument (e.g., accuracy or maximum number of iterations) in case you are unsure what value to use; you should be prepared
to use a different setting if the suggested value turns out to be unsuitable for your problem.
4.4 Example Programs and Results
The example program in Section 9 of most function documents illustrates a simple call of the function. The programs are designed so that they
can be fairly easily modified, and so serve as the basis for a simple program to solve your problem.
For each implementation of the Library, NAG distributes the example programs in machine-readable form, with all necessary
modifications already applied. Many sites make the programs accessible to you in this form. Generic forms of the programs,
without implementation-specific modifications, may be obtained directly from the NAG Web site. The
Users' Note for your implementation will mention any special changes which need to be made to the example programs.
These example programs contain a number of preprocessor identifiers such as NAG_CALL and NAG_IFMT to enable cross platform portability. These identifiers are subsequently replaced by appropriate implementation specific
tokens via the header files nag.h or nag_types.h, using the C preprocessor #defines.
Note that the results obtained from running the example programs may not be identical in all implementations, and may not
agree exactly with the results in the Manual which were obtained from a double precision implementation (with approximately
16 digits of precision).
For many function documents, a plot of the example program results is also provided. In some cases the example program has
been modified slightly to produce larger sets of results to give a more representative plot of the solution profile produced.
5 Support from NAG
NAG Response Centres
The NAG Response Centres are available for general enquiries from all users and also for technical queries from sites that
subscribe to the support service.
The Response Centres are open during office hours, but contact is possible by fax, email and telephone (answering machine)
at all times. Please see the
Users' Note or the NAG
web site for contact details.
When contacting one of the NAG Response Centres, it helps us to deal with your query quickly if you can quote your NAG user
reference and NAG product code.
NAG Web Site
The NAG
web site is an information service providing items of interest to users and prospective users of NAG products and services. The information
is regularly updated and reviewed, and includes implementation availability, descriptions of products, downloadable software,
case studies, industry articles and technical reports. The NAG
web site can be accessed via:
6 Background to NAG
Various aspects of the design and development of the NAG Library, and NAG's technical policies and organisation are given
in
Ford (1982),
Ford et al. (1979),
Ford and Pool (1984), and
Hague et al. (1982).
7 References
ACM (1960–1976) Collected algorithms from ACM index by subject to algorithms
ANSI/IEEE POSIX (1995) POSIX Standard Thread Library ANSI/IEEE POSIX 1003.1c:1995
Ford B (1982) Transportable numerical software
Lecture Notes in Computer Science 142 128–140 Springer–Verlag
Ford B, Bentley J, Du Croz J J and Hague S J (1979) The NAG Library ‘machine’
Softw. Pract. Exper. 9 (1) 65–72
Ford B and Pool J C T (1984) The evolving NAG Library service
Sources and Development of Mathematical Software (ed W Cowell) 375–397 Prentice–Hall
Hague S J, Nugent S M and Ford B (1982) Computer-based documentation for the NAG Library
Lecture Notes in Computer Science 142 91–127 Springer–Verlag
ISO/IEC (1990) Information technology – Programming Language C
Current C Language Standard ISO/IEC 9899:1990
Kernighan B W and Ritchie D M (1988)
The C Programming Language (2nd Edition) Prentice–Hall