/* nag_mv_dendrogram (g03ehc) Example Program.
 *
 * Copyright 1998 Numerical Algorithms Group.
 *
 * Mark 5, 1998.
 * Mark 8 revised, 2004.
 *
 */

#include <nag.h>
#include <stdio.h>
#include <nag_stdlib.h>
#include <nagg03.h>

#define X(I,J) x[(I)*tdx + J]
int main(void)
{

  Integer exit_status=0, i, *ilc=0, int_method, *iord=0, *isx=0, *iuc=0, j;
  Integer m, n, nsym, tdx;
  NagError fail;
  Nag_ClusterMethod method;
  Nag_DistanceType dist;
  Nag_MatUpdate update;
  Nag_VarScaleType scale;
  char **c=0, char_dist[2], char_scale[2], char_update[2];
  double *cd=0, *d=0, dmin_, *dord=0, dstep, *s=0, *x=0;

  INIT_FAIL(fail);

  Vprintf("nag_mv_dendrogram (g03ehc) Example Program Results\n\n");

  Vscanf("%*[^\n]");
  Vscanf("%ld",&n);
  Vscanf("%ld",&m);

  if (n>=2 && m>=1)
    {
      if ( !( cd = NAG_ALLOC(n-1, double)) ||
           !( d = NAG_ALLOC(n*(n-1)/2, double)) ||
           !( dord = NAG_ALLOC(n, double)) ||
           !( s = NAG_ALLOC(m, double)) ||
           !( x = NAG_ALLOC(n*m, double))  ||
           !( ilc = NAG_ALLOC(n-1, Integer)) ||
           !( iord = NAG_ALLOC(n, Integer)) ||
           !( isx = NAG_ALLOC(m, Integer)) ||
           !( iuc = NAG_ALLOC(n-1, Integer)) )
        {
          Vprintf("Allocation failure\n");
          exit_status = -1;
          goto END;
        }
      tdx = m;
    }
  else
    {
      Vprintf("Invalid n or m.\n");
      exit_status = 1;
      return exit_status;
    }
  Vscanf("%ld",&int_method);
  if (int_method == 1)
    method = Nag_SingleLink;
  else  if (int_method == 2)
    method = Nag_CompleteLink;
  else  if (int_method == 3)
    method = Nag_GroupAverage;
  else if (int_method == 4)
    method = Nag_Centroid;
  else  if (int_method == 5)
    method = Nag_Median;
  else
    method = Nag_MinVariance;


  Vscanf("%s",char_update);
  if (*char_update == 'U')
    update = Nag_MatUp;
  else
    update = Nag_NoMatUp;

  Vscanf("%s",char_dist);
  if (*char_dist == 'A')
    dist = Nag_DistAbs;
  else if (*char_dist == 'E')
    dist = Nag_DistEuclid;
  else
    dist = Nag_DistSquared;

  Vscanf("%s",char_scale);
  if (*char_scale == 'S')
    scale = Nag_VarScaleStd;
  else if (*char_scale == 'R')
    scale = Nag_VarScaleRange;
  else if (*char_scale == 'G')
    scale = Nag_VarScaleUser;
  else
    scale = Nag_NoVarScale;

  for (j = 0; j < n; ++j)
    {
      for (i = 0; i < m; ++i)
        Vscanf("%lf",&X(j,i));
    }
  for (i = 0; i < m; ++i)
    Vscanf("%ld",&isx[i]);
  for (i = 0; i < m; ++i)
    Vscanf("%lf",&s[i]);
  Vscanf("%lf",&dmin_);
  Vscanf("%lf",&dstep);
  Vscanf("%ld",&nsym);

  /* Compute the distance matrix */
  /* nag_mv_distance_mat (g03eac).
   * Compute distance (dissimilarity) matrix
   */
  nag_mv_distance_mat(update, dist, scale, n, m, x, tdx, isx, s, d, &fail);
  if (fail.code != NE_NOERROR)
    {
      Vprintf("Error from nag_mv_distance_mat (g03eac).\n%s\n", fail.message);
      exit_status = 1;
      goto END;
    }


  /* Perform clustering */
  /* nag_mv_hierar_cluster_analysis (g03ecc).
   * Hierarchical cluster analysis
   */
  nag_mv_hierar_cluster_analysis(method, n, d, ilc, iuc, cd, iord, dord, &fail);
  if (fail.code != NE_NOERROR)
    {
      Vprintf("Error from nag_mv_hierar_cluster_analysis (g03ecc).\n%s\n",
              fail.message);
      exit_status = 1;
      goto END;
    }

  /* Produce dendrograms */
  /* nag_mv_dendrogram (g03ehc).
   * Construct dendogram following
   * nag_mv_hierar_cluster_analysis (g03ecc)
   */
  nag_mv_dendrogram(Nag_DendEast, n, dord, dmin_, dstep, nsym, &c, &fail);
  if (fail.code != NE_NOERROR)
    {
      Vprintf("Error from nag_mv_dendrogram (g03ehc).\n%s\n", fail.message);
      exit_status = 1;
      goto END;
    }

  Vprintf("\nDendrogram, Orientation East\n\n");
  for (i=0; i<n; i++)
    {
      Vprintf("%s\n", c[i]);
    }

  Vscanf("%lf",&dmin_);
  Vscanf("%lf",&dstep);
  Vscanf("%ld",&nsym);
  /* nag_mv_dend_free (g03xzc).
   * Frees memory allocated to the dendrogram array in
   * nag_mv_dendrogram (g03ehc)
   */
  nag_mv_dend_free(&c);
  /* nag_mv_dendrogram (g03ehc), see above. */
  nag_mv_dendrogram(Nag_DendSouth, n, dord, dmin_, dstep, nsym, &c, &fail);
  if (fail.code != NE_NOERROR)
    {
      Vprintf("Error from nag_mv_dendrogram (g03ehc).\n%s\n", fail.message);
      exit_status = 1;
      goto END;
    }
  Vprintf("\n\n Dendrogram, Orientation South\n\n");
  for (i=0; i<nsym; i++)
    {
      Vprintf("%s\n", c[i]);
    }
  /* nag_mv_dend_free (g03xzc), see above. */
  nag_mv_dend_free(&c);
 END:
  if (cd) NAG_FREE(cd);
  if (d) NAG_FREE(d);
  if (dord) NAG_FREE(dord);
  if (s) NAG_FREE(s);
  if (x) NAG_FREE(x);
  if (ilc) NAG_FREE(ilc);
  if (iord) NAG_FREE(iord);
  if (isx) NAG_FREE(isx);
  if (iuc) NAG_FREE(iuc);
  return exit_status;
}